Population history of the plateau pika endemic to the Qinghai-Tibetan Plateau based on mtDNA sequence data

NWIPB OpenIR

	Population history of the plateau pika endemic to the Qinghai-Tibetan Plateau based on mtDNA sequence data
	Ci, H. X.1,2; Lin, G. H.1,2; Cai, Z. Y.1; Tang, L. Z.1,2; Su, J. P.1; Liu, J. Q.1,3
	2009-12-01
发表期刊	JOURNAL OF ZOOLOGY
ISSN	0952-8369
卷号	279 期号:4 页码:396-403
文章类型	Article
摘要	We studied 1616 bp of mtDNA sequence in plateau pika Ochotona curzoniae sampled from 10 geographical regional groups to study the population history as well as long-term gene flow of O. curzoniae. We detected 153 haplotypes in 245 individuals. Mismatch analyses detected rapid population expansion in nine regional groups. Long-term estimates of gene flow revealed a unidirectional manner from peripheral groups towards central plateau groups. In contrast, gene flow among central plateau groups was bidirectional. Our results indicate that the population expansion of most groups occurred 0.24-0.03 Mya, which mostly coincides with the interglacial period before the last glacial maximum. Gene flow of O. curzoniae was closely related to the different effects of the extensive glacial period (EGP) and the last glacial period (LGP) on the species. The EGP had caused extinction of all central populations, while the LGP had very limited influence on the populations that recolonized the central region. However, the glaciers in the relatively humid areas surrounding the interior of the plateau during the LGP were substantial and had prevented or greatly reduced the 'counter' gene flow from the central populations to the edge populations, resulting in a unidirectional gene flow. A hierarchical analysis of molecular variance showed that 55.1% of the total variance was explained by among-groups structuring while 34.2% was explained by the differences among individuals within populations. Compared with other endemic species on the Qinghai-Tibetan Plateau, O. curzoniae has a moderate level of the population genetic structure, which is higher than birds and lower than lizard, due to its limited dispersal ability.; We studied 1616 bp of mtDNA sequence in plateau pika Ochotona curzoniae sampled from 10 geographical regional groups to study the population history as well as long-term gene flow of O. curzoniae. We detected 153 haplotypes in 245 individuals. Mismatch analyses detected rapid population expansion in nine regional groups. Long-term estimates of gene flow revealed a unidirectional manner from peripheral groups towards central plateau groups. In contrast, gene flow among central plateau groups was bidirectional. Our results indicate that the population expansion of most groups occurred 0.24-0.03 Mya, which mostly coincides with the interglacial period before the last glacial maximum. Gene flow of O. curzoniae was closely related to the different effects of the extensive glacial period (EGP) and the last glacial period (LGP) on the species. The EGP had caused extinction of all central populations, while the LGP had very limited influence on the populations that recolonized the central region. However, the glaciers in the relatively humid areas surrounding the interior of the plateau during the LGP were substantial and had prevented or greatly reduced the 'counter' gene flow from the central populations to the edge populations, resulting in a unidirectional gene flow. A hierarchical analysis of molecular variance showed that 55.1% of the total variance was explained by among-groups structuring while 34.2% was explained by the differences among individuals within populations. Compared with other endemic species on the Qinghai-Tibetan Plateau, O. curzoniae has a moderate level of the population genetic structure, which is higher than birds and lower than lizard, due to its limited dispersal ability.
关键词	Ochotona Curzoniae Population Expansion Gene Flow Population Genetic Structure Qinghai-tibetan Plateau
WOS标题词	Science & Technology ; Life Sciences & Biomedicine
关键词[WOS]	CYTOCHROME-B SEQUENCES ; MITOCHONDRIAL-DNA ; ICE AGES ; PHYLOGEOGRAPHY ; EVOLUTION ; QUATERNARY ; DIVERSITY ; MAXIMUM ; GROWTH ; SPECIATION
收录类别	SCI
语种	英语
WOS研究方向	Zoology
WOS类目	Zoology
WOS记录号	WOS:000272172300011
引用统计	被引频次：30[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://210.75.249.4/handle/363003/1794
专题	中国科学院西北高原生物研究所
作者单位	1.Chinese Acad Sci, NW Inst Plateau Biol, Key Lab Adaptat & Evolut Plateau Biota, Xining 810001, Qinghai, Peoples R China 2.Chinese Acad Sci, Grad Univ, Coll Life Sci, Xining 810001, Qinghai, Peoples R China 3.Lanzhou Univ, Key Lab Arid & Grassland Ecol, Lanzhou, Gansu, Peoples R China
推荐引用方式 GB/T 7714	Ci, H. X.,Lin, G. H.,Cai, Z. Y.,et al. Population history of the plateau pika endemic to the Qinghai-Tibetan Plateau based on mtDNA sequence data[J]. JOURNAL OF ZOOLOGY,2009,279(4):396-403.
APA	Ci, H. X.,Lin, G. H.,Cai, Z. Y.,Tang, L. Z.,Su, J. P.,&Liu, J. Q..(2009).Population history of the plateau pika endemic to the Qinghai-Tibetan Plateau based on mtDNA sequence data.JOURNAL OF ZOOLOGY,279(4),396-403.
MLA	Ci, H. X.,et al."Population history of the plateau pika endemic to the Qinghai-Tibetan Plateau based on mtDNA sequence data".JOURNAL OF ZOOLOGY 279.4(2009):396-403.