Genetic diversity in endangered Notopterygium forbesii Boissieu based on intraspecies sequence variation of chloroplast DNA and implications for conservation

NWIPB OpenIR

	Genetic diversity in endangered Notopterygium forbesii Boissieu based on intraspecies sequence variation of chloroplast DNA and implications for conservation
	Zhou, Guoying ; Yang, Lucun ; Li, Chunli ; Xua, Wenhua ; Chen, Guichen
	2010-10-01
发表期刊	BIOCHEMICAL SYSTEMATICS AND ECOLOGY ; Zhou, GY; Yang, LC; Li, CL; Xua, WH; Chen, GC.Genetic diversity in endangered Notopterygium forbesii Boissieu based on intraspecies sequence variation of chloroplast DNA and implications for conservation,BIOCHEMICAL SYSTEMATICS AND ECOLOGY,2010,38(5):911-916
摘要	A thorough understanding of the levels and partitioning of genetic variation across populations and geographical regions of endangered species is a prerequisite to ensure effective conservation and/or restoration activities. Here, we examined chloroplast DNA (cpDNA) trnH-psbA intergenic spacer sequences variation within Notopterygium forbesii, an endangered and endemic perennial herb in China. Sequence data obtained from 141 individuals in 14 populations revealed twenty-two haplotypes. A high level of haplotype diversity (Hd = 0.81) and low level of nucleotide diversity (Pi = 0.0047) were detected. Low genetic differentiation among populations and also among regions was consistently indicated by both hierarchical analyses of molecular variance (AMOVA) and the structure of a neighbor-joining tree. Low level of population differentiation between populations or between regions in cpDNA sequences may be due to effects of the abundance of ancestral haplotype sharing and the high number of private haplotypes fixed for each population. Based on our results, we proposed some conservation strategies. Crown Copyright (C) 2010 Published by Elsevier Ltd. All rights reserved.; A thorough understanding of the levels and partitioning of genetic variation across populations and geographical regions of endangered species is a prerequisite to ensure effective conservation and/or restoration activities. Here, we examined chloroplast DNA (cpDNA) trnH-psbA intergenic spacer sequences variation within Notopterygium forbesii, an endangered and endemic perennial herb in China. Sequence data obtained from 141 individuals in 14 populations revealed twenty-two haplotypes. A high level of haplotype diversity (Hd = 0.81) and low level of nucleotide diversity (Pi = 0.0047) were detected. Low genetic differentiation among populations and also among regions was consistently indicated by both hierarchical analyses of molecular variance (AMOVA) and the structure of a neighbor-joining tree. Low level of population differentiation between populations or between regions in cpDNA sequences may be due to effects of the abundance of ancestral haplotype sharing and the high number of private haplotypes fixed for each population. Based on our results, we proposed some conservation strategies. Crown Copyright (C) 2010 Published by Elsevier Ltd. All rights reserved.
文献类型	期刊论文
条目标识符	http://210.75.249.4/handle/363003/56122
专题	中国科学院西北高原生物研究所
推荐引用方式 GB/T 7714	Zhou, Guoying,Yang, Lucun,Li, Chunli,et al. Genetic diversity in endangered Notopterygium forbesii Boissieu based on intraspecies sequence variation of chloroplast DNA and implications for conservation[J]. BIOCHEMICAL SYSTEMATICS AND ECOLOGY, Zhou, GY; Yang, LC; Li, CL; Xua, WH; Chen, GC.Genetic diversity in endangered Notopterygium forbesii Boissieu based on intraspecies sequence variation of chloroplast DNA and implications for conservation,BIOCHEMICAL SYSTEMATICS AND ECOLOGY,2010,38(5):911-916,2010.
APA	Zhou, Guoying,Yang, Lucun,Li, Chunli,Xua, Wenhua,&Chen, Guichen.(2010).Genetic diversity in endangered Notopterygium forbesii Boissieu based on intraspecies sequence variation of chloroplast DNA and implications for conservation.BIOCHEMICAL SYSTEMATICS AND ECOLOGY.
MLA	Zhou, Guoying,et al."Genetic diversity in endangered Notopterygium forbesii Boissieu based on intraspecies sequence variation of chloroplast DNA and implications for conservation".BIOCHEMICAL SYSTEMATICS AND ECOLOGY (2010).