NWIPB OpenIR
High-throughput sequencing reveals the core gut microbiome of Bar-headed goose (Anser indicus) in different wintering areas in Tibet
Wang, Wen1,2; Cao, Jian1,3; Yang, Fang1; Wang, Xuelian1; Zheng, Sisi1,3; Sharshov, Kirill4; Li, Laixing1
2016-04-01
发表期刊MICROBIOLOGYOPEN
卷号5期号:2页码:287-295
文章类型Article
摘要Elucidating the spatial dynamic and core gut microbiome related to wild bar-headed goose is of crucial importance for probiotics development that may meet the demands of bar-headed goose artificial breeding industries and accelerate the domestication of this species. However, the core microbial communities in the wild bar-headed geese remain totally unknown. Here, for the first time, we present a comprehensive survey of bar-headed geese gut microbial communities by Illumina high-throughput sequencing technology using nine individuals from three distinct wintering locations in Tibet. A total of 236,676 sequences were analyzed, and 607 OTUs were identified. We show that the gut microbial communities of bar-headed geese have representatives of 14 phyla and are dominated by Firmicutes, Proteobacteria, Actinobacteria, and Bacteroidetes. The additive abundance of these four most dominant phyla was above 96% across all the samples. At the genus level, the sequences represented 150 genera. A set of 19 genera were present in all samples and considered as core gut microbiome. The top seven most abundant core genera were distributed in that four dominant phyla. Among them, four genera (Lactococcus, Bacillus, Solibacillus, and Streptococcus) belonged to Firmicutes, while for other three phyla, each containing one genus, such as Proteobacteria (genus Pseudomonas), Actinobacteria (genus Arthrobacter), and Bacteroidetes (genus Bacteroides). This broad survey represents the most in-depth assessment, to date, of the gut microbes that associated with bar-headed geese. These data create a baseline for future bar-headed goose microbiology research, and make an original contribution to probiotics development for bar-headed goose artificial breeding industries.
关键词Artificial Breeding Bar-headed Geese Gut Microbiome Illumina High-throughput Sequencing Probiotics
WOS标题词Science & Technology ; Life Sciences & Biomedicine
DOI10.1002/mbo3.327
关键词[WOS]RIBOSOMAL-RNA GENE ; CURRENT KNOWLEDGE ; COMMUNITIES ; DIVERSITY ; CHALLENGES ; DISEASE ; SYSTEM ; HEALTH ; READS ; WORLD
收录类别SCI
语种英语
项目资助者State Forestry Administration Program(Y31I351B01) ; National Key Basic Research Program (973 Program) of China(2010CB530301)
WOS研究方向Microbiology
WOS类目Microbiology
WOS记录号WOS:000374167800008
引用统计
被引频次:33[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符http://210.75.249.4/handle/363003/5706
专题中国科学院西北高原生物研究所
作者单位1.Chinese Acad Sci, Northwest Inst Plateau Biol, Key Lab Adaptat & Evolut Plateau Biota, Xining 810000, Peoples R China
2.Sichuan Univ, Coll Life Sci, Ctr Growth Metab & Aging, Chengdu 610000, Peoples R China
3.Univ Chinese Acad Sci, Beijing 100101, Peoples R China
4.Res Inst Expt & Clin Med, Novosibirsk 630117, Russia
推荐引用方式
GB/T 7714
Wang, Wen,Cao, Jian,Yang, Fang,et al. High-throughput sequencing reveals the core gut microbiome of Bar-headed goose (Anser indicus) in different wintering areas in Tibet[J]. MICROBIOLOGYOPEN,2016,5(2):287-295.
APA Wang, Wen.,Cao, Jian.,Yang, Fang.,Wang, Xuelian.,Zheng, Sisi.,...&Li, Laixing.(2016).High-throughput sequencing reveals the core gut microbiome of Bar-headed goose (Anser indicus) in different wintering areas in Tibet.MICROBIOLOGYOPEN,5(2),287-295.
MLA Wang, Wen,et al."High-throughput sequencing reveals the core gut microbiome of Bar-headed goose (Anser indicus) in different wintering areas in Tibet".MICROBIOLOGYOPEN 5.2(2016):287-295.
条目包含的文件
条目无相关文件。
个性服务
推荐该条目
保存到收藏夹
查看访问统计
导出为Endnote文件
谷歌学术
谷歌学术中相似的文章
[Wang, Wen]的文章
[Cao, Jian]的文章
[Yang, Fang]的文章
百度学术
百度学术中相似的文章
[Wang, Wen]的文章
[Cao, Jian]的文章
[Yang, Fang]的文章
必应学术
必应学术中相似的文章
[Wang, Wen]的文章
[Cao, Jian]的文章
[Yang, Fang]的文章
相关权益政策
暂无数据
收藏/分享
所有评论 (0)
暂无评论
 

除非特别说明,本系统中所有内容都受版权保护,并保留所有权利。