Metagenomic profiling of gut microbial communities in both wild and artificially reared Bar-headed goose (Anser indicus)

doi:10.1002/mbo3.429

NWIPB OpenIR

	Metagenomic profiling of gut microbial communities in both wild and artificially reared Bar-headed goose (Anser indicus)
	Wang, Wen 1,2,3; Zheng, Sisi 3,4; Sharshov, Kirill 5; Sun, Hao 3; Yang, Fang 3; Wang, Xuelian 3; Li, Laixing 3; Xiao, Zhixiong 1,2
	2017-04-01
发表期刊	MICROBIOLOGYOPEN
卷号	6 期号:2
文章类型	Article
摘要	Bar-headed goose (Anser indicus), a species endemic to Asia, has become one of the most popular species in recent years for rare bird breeding industries in several provinces of China. There has been no information on the gut metagenome configuration in both wild and artificially reared Bar-headed geese, even though the importance of gut microbiome in vertebrate nutrient and energy metabolism, immune homeostasis and reproduction is widely acknowledged. In this study, metagenomic methods have been used to describe the microbial community structure and composition of functional genes associated with both wild and artificially reared Bar-headed goose. Taxonomic analyses revealed that Firmicutes, Proteobacteria, Actinobacteria and Bacteroidetes were the four most abundant phyla in the gut of Bar-headed geese. Bacteroidetes were significantly abundant in the artificially reared group compared to wild group. Through functional profiling, we found that artificially reared Bar-headed geese had higher bacterial gene content related to carbohydrate transport and metabolism, energy metabolism and coenzyme transport, and metabolism. A comprehensive gene catalog of Bar-headed geese metagenome was built, and the metabolism of carbohydrate, amino acid, nucleotide, and energy were found to be the four most abundant categories. These results create a baseline for future Bar-headed goose microbiology research, and make an original contribution to the artificial rearing of this bird.
关键词	Bar-headed Goose Gut Microbiome High-throughput Sequencing Metagenomics Taxonomic Analysis
WOS标题词	Science & Technology ; Life Sciences & Biomedicine
DOI	10.1002/mbo3.429
关键词[WOS]	INTERSPECIFIC VARIATIONS ; HUMAN INTESTINE ; CYGNOIDES ; TRANSCRIPTOME ; PATTERNS ; HORMONES ; RELEASE ; GENE
收录类别	SCI
语种	英语
项目资助者	State Forestry Administration Program(Y31I351B01) ; National Key Basic Research Program of China(2010CB530301) ; China Biodiversity Observation Networks
WOS研究方向	Microbiology
WOS类目	Microbiology
WOS记录号	WOS:000398839900011
引用统计	被引频次：18[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://210.75.249.4/handle/363003/6819
专题	中国科学院西北高原生物研究所
作者单位	1.Sichuan Univ, Coll Life Sci, Ctr Growth Metab & Aging, Key Lab Bioresource & Ecoenvironm,Minist Educ, Chengdu, Peoples R China 2.Sichuan Univ, State Key Lab Biotherapy, Chengdu, Peoples R China 3.Chinese Acad Sci, Northwest Inst Plateau Biol, Key Lab Adaptat & Evolut Plateau Biota, Xining, Peoples R China 4.Univ Chinese Acad Sci, Beijing, Peoples R China 5.Res Inst Expt & Clin Med, Novosibirsk, Russia
推荐引用方式 GB/T 7714	Wang, Wen,Zheng, Sisi,Sharshov, Kirill,et al. Metagenomic profiling of gut microbial communities in both wild and artificially reared Bar-headed goose (Anser indicus)[J]. MICROBIOLOGYOPEN,2017,6(2).
APA	Wang, Wen.,Zheng, Sisi.,Sharshov, Kirill.,Sun, Hao.,Yang, Fang.,...&Xiao, Zhixiong.(2017).Metagenomic profiling of gut microbial communities in both wild and artificially reared Bar-headed goose (Anser indicus).MICROBIOLOGYOPEN,6(2).
MLA	Wang, Wen,et al."Metagenomic profiling of gut microbial communities in both wild and artificially reared Bar-headed goose (Anser indicus)".MICROBIOLOGYOPEN 6.2(2017).