Knowledge Management System of Northwest Institute of Plateau Biology, CAS
The complete mitochondrial genome of Gymnocypris przewalskii kelukehuensis (Teleostei: Cyprinidae) | |
Tong, Chao1,2,3,4; Tang, Yongtao1,2,3,4; Zhao, Kai1,2,3 | |
2017-09-01 | |
发表期刊 | CONSERVATION GENETICS RESOURCES |
ISSN | 1877-7252 |
卷号 | 9期号:3页码:443-445 |
文章类型 | Article |
摘要 | Gymnocypris przewalskii kelukehuensis: (Teleostei: Cyprinidae) is a new subspecies of Gymnocypris przewalskii which endemic to Lake Keluke on the Tibetan Plateau,. However, it is now threatened by exotic species invasions and overfishing, and its natural population has been dramatically decreased. Here we firstly report its complete mitochondrial genome by low-coverage whole genome sequencing method. The total length of mitogenome is 16,682 bp, including 22 transfer RNAs (tRNAs), 13 protein-coding genes (PCGs) and two ribosomal RNAs (rRNAs). The putative control region is located between tRNA-Phe and tRNA-Pro, with an A + T content of 64.11%. The base composition of the genome is A (28.73%), C (25.86%), G (18.04%) and C (27.35%) with an overall GC content of 43.91%. Phylogenetic analysis suggests that G. p. kelukehuensis is closely related to G. przewalskii complex. |
关键词 | Illumina Sequencing Gymnocypris Przewalskii Kelukehuensis Subspecies Mitogenome |
WOS标题词 | Science & Technology ; Life Sciences & Biomedicine |
DOI | 10.1007/s12686-017-0707-3 |
收录类别 | SCI |
语种 | 英语 |
项目资助者 | National Natural Science Foundation of China(31572258 ; Chinese Academy of Sciences(KSCX2-EW-N-004) ; Open Foundation from the Qinghai Key Laboratory of Tibetan Medicine Pharmacology and Safety Evaluation(2014-ZY-03) ; 31500306) |
WOS研究方向 | Biodiversity & Conservation ; Genetics & Heredity |
WOS类目 | Biodiversity Conservation ; Genetics & Heredity |
WOS记录号 | WOS:000407231600024 |
出版者 | SPRINGER |
引用统计 | |
文献类型 | 期刊论文 |
条目标识符 | http://210.75.249.4/handle/363003/9790 |
专题 | 中国科学院西北高原生物研究所 |
通讯作者 | Zhao, Kai |
作者单位 | 1.Chinese Acad Sci, Northwest Inst Plateau Biol, Key Lab Adaptat & Evolut Plateau Biota, Xining 810001, Qinghai, Peoples R China 2.Chinese Acad Sci, Northwest Inst Plateau Biol, Lab Plateau Fish Evolutionary & Funct Genom, Xining 810001, Qinghai, Peoples R China 3.Chinese Acad Sci, Northwest Inst Plateau Biol, Qinghai Key Lab Anim Ecol Genom, Xining 810001, Qinghai, Peoples R China 4.Univ Chinese Acad Sci, Beijing 100049, Peoples R China |
推荐引用方式 GB/T 7714 | Tong, Chao,Tang, Yongtao,Zhao, Kai. The complete mitochondrial genome of Gymnocypris przewalskii kelukehuensis (Teleostei: Cyprinidae)[J]. CONSERVATION GENETICS RESOURCES,2017,9(3):443-445. |
APA | Tong, Chao,Tang, Yongtao,&Zhao, Kai.(2017).The complete mitochondrial genome of Gymnocypris przewalskii kelukehuensis (Teleostei: Cyprinidae).CONSERVATION GENETICS RESOURCES,9(3),443-445. |
MLA | Tong, Chao,et al."The complete mitochondrial genome of Gymnocypris przewalskii kelukehuensis (Teleostei: Cyprinidae)".CONSERVATION GENETICS RESOURCES 9.3(2017):443-445. |
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