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Phylogeography of Schizopygopsis stoliczkai (Cyprinidae) in Northwest Tibetan Plateau area
Wanghe, Kunyuan1,2,3,4; Tang, Yongtao1,2,3,4; Tian, Fei1,2,4; Feng, Chenguang1,2,3,4; Zhang, Renyi5; Li, Guogang6; Liu, Sijia1,2,3,4; Zhao, Kai1,2,4
2017-11-01
Source PublicationECOLOGY AND EVOLUTION
ISSN2045-7758
Volume7Issue:22Pages:9602-9612
SubtypeArticle
AbstractSchizopygopsis stoliczkai (Cyprinidae, subfamily Schizothoracinae) is one of the major freshwater fishes endemic to the northwestern margin of the Tibetan Plateau. In the current study, we used mitochondrial DNA markers cytochrome b (Cyt b) and 16S rRNA (16S), as well as the nuclear marker, the second intron of the nuclear beta-actin gene (Act2), to uncover the phylogeography of S.stoliczkai. In total, we obtained 74 haplotypes from 403 mitochondrial concatenated sequences. The mtDNA markers depict the phylogenetic structures of S.stoliczkai, which consist of clade North and clade South. The split time of the two clades is dated back to 4.27Mya (95% HPD=1.96-8.20Mya). The estimated split time is earlier than the beginning of the ice age of Pleistocene (2.60Mya), suggesting that the northwestern area of the Tibetan Plateau probably contain at least two glacial refugia for S.stoliczkai. SAMOVA supports the formation of four groups: (i) the Karakash River group; (ii) The Lake Pangong group; (iii) the Shiquan River group; (iv) the Southern Basin group. Clade North included Karakash River, Lake Pangong, and Shiquan River groups, while seven populations of clade South share the haplotypes. Genetic diversity, star-like network, BSP analysis, as well as negative neutrality tests indicate recent expansions events of S.stoliczkai. Conclusively, our results illustrate the phylogeography of S.stoliczkai, implying the Shiquan River is presumably the main refuge for S.stoliczkai.
KeywordHistorical Demography Phylogeography Pleistocene Glacial Refugia Schizopygopsis Stoliczkai Tibetan Plateau
WOS HeadingsScience & Technology ; Life Sciences & Biomedicine
DOI10.1002/ece3.3452
WOS KeywordSCHIZOTHORACINE FISHES TELEOSTEI ; ENVIRONMENTAL-CHANGES ; MOLECULAR PHYLOGENY ; POPULATION-GENETICS ; DNA POLYMORPHISM ; EAST-ASIA ; MITOCHONDRIAL ; UPLIFT ; CYPRINIFORMES ; GLACIATION
Indexed BySCI
Language英语
Funding OrganizationKey Innovation Plan of Chinese Academy of Sciences(KSCX2-EW-N-004) ; National Natural Science Foundation of China(31172070 ; 31572258)
WOS Research AreaEnvironmental Sciences & Ecology ; Evolutionary Biology
WOS SubjectEcology ; Evolutionary Biology
WOS IDWOS:000415900800033
PublisherWILEY
Citation statistics
Cited Times:1[WOS]   [WOS Record]     [Related Records in WOS]
Document Type期刊论文
Identifierhttp://210.75.249.4/handle/363003/13273
Collection中国科学院西北高原生物研究所
Corresponding AuthorZhao, Kai
Affiliation1.Chinese Acad Sci, Northwest Inst Plateau Biol, Key Lab Adaptat & Evolut Plateau Biota, Xining, Qinghai, Peoples R China
2.Chinese Acad Sci, Northwest Inst Plateau Biol, Lab Plateau Fish Evolutionary & Funct Genom, Xining, Qinghai, Peoples R China
3.Qinghai Key Lab Anim Ecol Genom, Xining, Qinghai, Peoples R China
4.Univ Chinese Acad Sci, Beijing, Peoples R China
5.Guizhou Normal Univ, Guiyang, Guizhou, Peoples R China
6.Chinese Acad Sci, Xishuangbanna Trop Bot Garden, Mengla, Peoples R China
Recommended Citation
GB/T 7714
Wanghe, Kunyuan,Tang, Yongtao,Tian, Fei,et al. Phylogeography of Schizopygopsis stoliczkai (Cyprinidae) in Northwest Tibetan Plateau area[J]. ECOLOGY AND EVOLUTION,2017,7(22):9602-9612.
APA Wanghe, Kunyuan.,Tang, Yongtao.,Tian, Fei.,Feng, Chenguang.,Zhang, Renyi.,...&Zhao, Kai.(2017).Phylogeography of Schizopygopsis stoliczkai (Cyprinidae) in Northwest Tibetan Plateau area.ECOLOGY AND EVOLUTION,7(22),9602-9612.
MLA Wanghe, Kunyuan,et al."Phylogeography of Schizopygopsis stoliczkai (Cyprinidae) in Northwest Tibetan Plateau area".ECOLOGY AND EVOLUTION 7.22(2017):9602-9612.
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